Entry Detail



General Information

Database ID:LDA0006818
Species:Mus musculus
Confidence Score:0.9462
Contents:>> ncRNA Information
>> Regulatory Relationship
>> Disease Information
>> Evidence Support
>> Reference

 

ncRNA Information

ncRNA Symbol:Srsf9
Full Name:serine/arginine-rich splicing factor 9
Category:lncRNA
Species:Mus musculus
Synonyms:2610029M16Rik//Sfrs9//SRp30c
Chromosome:5
Strand:+
Coordinate:
Start Site(bp):115327177End Site(bp):115333080
Gene Summary:N/A
External Links:
Ensembl ID:ENSMUSG00000029538
HGNC ID:N/A
Entrez Gene:108014
VEGA ID:OTTMUSG00000014654
UCSC ID:N/A
ENA:N/A
RefSeq Accession:N/A
UniProtKB:N/A

 

Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
Pop5
5
115235836
115245351
+
Rnf10
5
115241412
115272898
-
Coq5
5
115279666
115296972
+
Dynll1
5
115297110
115300999
-
Gatc
5
115333239
115341178
-
Triap1
5
115341225
115343569
+
Cox6a1
5
115345642
115348981
-
Msi1
5
115429599
115455698
+
miRNA targets:N/A
Display:

 

Disease Information

 Disease OntologyMeSH
Disease ID:D007511N/A
Disease Name:IschemiaN/A
Category:MeSHN/A
Type:Pathological Conditions, Signs and SymptomsN/A
Define:A hypoperfusion of the BLOOD through an organ or tissue caused by a PATHOLOGIC CONSTRICTION or obstruction of its BLOOD VESSELS, or an absence of BLOOD CIRCULATION.N/A
Alias:IschemiasN/A

 

Evidence Support

Strong Evidence:Immunoblot//qPCR
Weak Evidence:Microarray
Prediction Method:N/A

 

Reference

[1] PubMed ID:24312245
Disease Name:Ischemia
Sample:N/A
Dysfunction Pattern:Expression [differentially expressed]
Validated Method:Immunoblot//qPCR//Microarray
Description:Classification and validation of deregulated LncRNAs in ischemia/reperfusion-treated mouse livers.
Author:Chen Z,Jia S,Li D,Cai J,Tu J,Geng B,Guan Y,Cui Q,Yang J
Year:2013
Title:Silencing of long noncoding RNA AK139328 attenuates ischemia/reperfusion injury in mouse livers.
Causality:No