Tutorial


The usage of LncRNADisease v2.0 database is as follows

1. Overview of LncRNADisease v2.0
     1. Main functions of the database are provided in the menu bar.
     2. Updated news about the database.
     3. Main statistics of the database.
     4. Related resources to the database.
     5. Distribution of all experimental data in the database.


2. Search Database
     The SEARCH page is displayed as follow
     1. Select a category: Three choices are provided.
     2. Input a keyword corresponding to the selected category.
     3. Five categories provided to filter results

Notes:
     ① Use NCBI Gene/Disease Ontology/MeSH to normalize your input information.
     ② If you got no result or too few results, you may shorten your keywords.


3. Search Result
The Result page is displayed as follow.
In the Result page, all associations are listed with basic information including Symbol, Category, Species, Disease Name, Detection Method, Prediction Method and Score.
     1. Total page and amount of results.
     2. Click to turn the page.
     3. Click to link to the Entry Detail page.


4. Browse Database
The BROWSE page is displayed as follow.
Associations can be displayed selectively according to selected conditions.
     1. Browse by different categories.
     2. Database items.


5. Entry Detail
The Entry Detail page is displayed as follow.
In the Entry Detail page, you can get information including General Information, ncRNA Information, Regulatory Relationship, Disease Information, Evidence Support and Reference.
     1. Click Ensembl ID, HGNC ID, Entrez Gene, VEGA ID, UCSC ID, ENA, RefSeq Asscession, UniProtKB to get more detailed information in external databases.
     2. Browse Disease Ontology ID/MeSH to get more detailed information in Disease Ontology/MeSH.
     3. Click PubMed ID to get more detailed information in NCBI.


6. Causative Associations
Currently, Users can see if an association is annotated to be causative in the Entry Detail page (to enter the Entry Detail page, see 3-3 Click to link to the Entry Detail page).

Also, the CAUSATIVE page provides search and browse function for the causative associations. Associations can be displayed selectively according to selected conditions.
1. Query for different ncRNAs / diseases.
2. Browse by different ncRNAs / diseases.
3. Click the PubMed ID to get more information in NCBI.



7. About Us
This database is hosted by Dong Lab, Shanghai Key Laboratory of Regulatory Biology, Institute of Biomedical Sciences, School of Life Sciences, East China Normal University
If you have any questions or suggestions about our database, please don’t hesitate to contact us.
Email: ddong.ecnu@gmail.com
Database Administrator: zhenyang@fudan.edu.cn