Entry Detail


General Information

Database ID: LDA0000757
Species: Homo sapiens
Confidence Score: 0.731059
Contents: >> ncRNA Information
>> ncRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference
Causality: Yes
Clinical Significance: Unknown

 


ncRNA Information

Reference Genome Note: GRCh38 for human lncRNAs; GRCm39 for mouse lncRNAs; mRatBN7.2 for rat lncRNAs; hg19 for human circRNAs; mm9 for mouse circRNAs.

ncRNA Symbol:EMC9
Full Name:ER membrane protein complex subunit 9
Category:LncRNA
Species:Homo sapiens
Synonyms:C14orf122|CGI-112|FAM158A
Chromosome:14
Strand:-
Coordinate:
Start Site(bp):24138965End Site(bp):24141591
External Links:
Ensembl ID:ENSG00000285377
Ensembl Transcript ID:N/A
Entrez Gene:51016.0
NONCODE ID:N/A
RefSeq Accession:N/A

 

ncRNA Association Statistics

Total Associated Disease Number:2   
More Information
Causal Disease Number:2
Network:
Top Causal Diseases:
Retinoblastoma  (Score: 0.731059)
Retinoblastoma  (Score: 0.731059)
More Information

 

 

Disease Information

 Disease OntologyMeSH
Disease ID:DOID:768D012175
Disease Name:retinoblastomaRetinoblastoma
Category:Disease OntologyMeSH
Type:Neoplasms
Define:A retinal cell cancer and malignant neoplasm of retina and neuroblastoma and neuroendocrine tumors that derives_from the tissues of the retina.A malignant tumor arising from the nuclear layer of the retina that is the most common primary tumor of the eye in children. The tumor tends to occur in early childhood or infancy and may be present at birth. The majority are sporadic, but the condition may be transmitted as an autosomal dominant trait. Histologic features include dense cellularity, small round polygonal cells, and areas of calcification and necrosis. An abnormal pupil reflex (leukokoria); NYSTAGMUS, PATHOLOGIC; STRABISMUS; and visual loss represent common clinical characteristics of this condition. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2104)
Alias:RB//RB - Retinoblastoma//neuroblastoma of RetinaRetinoblastoma//Retinoblastomas//Neuroblastoma, Retinal//Neuroblastomas, Retinal//Retinal Neuroblastoma//Retinal Neuroblastomas//Glioma, Retinal//Gliomas, Retinal//Retinal Glioma//Retinal Gliomas//Eye Cancer, Retinoblastoma//Cancer, Retinoblastoma Eye//Cancers, Retinoblastoma Eye//Eye Cancers, Retinoblastoma//Retinoblastoma Eye Cancer//Retinoblastoma Eye Cancers//Glioblastoma, Retinal//Glioblastomas, Retinal//Retinal Glioblastoma//Retinal Glioblastomas//Sporadic Retinoblastoma//Retinoblastoma, Sporadic//Retinoblastomas, Sporadic//Sporadic Retinoblastomas//Familial Retinoblastoma//Familial Retinoblastomas//Retinoblastoma, Familial//Retinoblastomas, Familial//Hereditary Retinoblastoma//Hereditary Retinoblastomas//Retinoblastoma, Hereditary//Retinoblastomas, Hereditary

 

Disease Association Statistics

Total Associated ncRNA Number:144   
More Information
Causal ncRNA Number:96
Network:
Top Causal ncRNAs:
MALAT1  (Score: 1)
XIST  (Score: 1)
hsa_circ_0000527  (Score: 1)
hsa_circ_0000527  (Score: 1)
NEAT1  (Score: 1)
XIST  (Score: 1)
MALAT1  (Score: 1)
NEAT1  (Score: 1)
hsa_circ_0000034  (Score: 0.999893)
FEZF1-AS1  (Score: 0.999893)
More Information

 

Evidence Support

Strong Evidence:TUNEL//Western Blot//Transwell Assay//Transfection//Tunel//Flow Cytometry//qRT-PCR//Proliferation Assay//PCR//Cell Proliferation Assay//IHC//IF
Weak Evidence:

 

Reference

[1] PubMed ID:34102206
Disease Name:Retinoblastoma
Sample:RB tissues and cells
Dysfunction Pattern:Interaction(miR-138-5p/SLC7A5 axis)
Validated Method:TUNEL//Western Blot//Transfection//Tunel//Flow Cytometry//qRT-PCR//Proliferation Assay//IF//PCR//Cell Proliferation Assay//IHC//Transwell Assay
Description:Circ-FAM158A and SLC7A5 were overexpressed and miR-138-5p was downregulated in RB tissues and cells. MiR-138-5p was a direct target of circ-FAM158A, and miR-138-5p inhibition reversed the inhibitory effect of circ-FAM158A silence on the progression of RB cells. Additionally, SLC7A5 was identified as a target of miR-138-5p, and SLC7A5 overexpression abated the anti-tumor roles of miR-138-5p in RB cells.
Causality:Yes
Causal Description:Circ-FAM158A knockdown inhibited RB cell proliferation, metastasis, and promoted apoptosis in vitro and in vivo.
Clinical-realted Application: