Entry Detail


General Information

Database ID: LDA0002324
Species: Homo sapiens
Confidence Score: 0.731059
Contents: >> ncRNA Information
>> ncRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference
Causality: Yes
Clinical Significance: Unknown

 


ncRNA Information

Reference Genome Note: GRCh38 for human lncRNAs; GRCm39 for mouse lncRNAs; mRatBN7.2 for rat lncRNAs; hg19 for human circRNAs; mm9 for mouse circRNAs.

ncRNA Symbol:LINC01139
Full Name:long intergenic non-protein coding RNA 1139
Category:LncRNA
Species:Homo sapiens
Synonyms:LINK-A|LINKA
Chromosome:1
Strand:-
Coordinate:
Start Site(bp):238480384End Site(bp):238486017
External Links:
Ensembl ID:ENSG00000215808
Ensembl Transcript ID:N/A
Entrez Gene:339535.0
NONCODE ID:N/A
RefSeq Accession:N/A

 

ncRNA Association Statistics

Total Associated Disease Number:18   
More Information
Causal Disease Number:14
Network:
Top Causal Diseases:
Osteosarcoma  (Score: 0.985791)
Carcinoma, Non-Small-Cell Lung  (Score: 0.985791)
Osteosarcoma  (Score: 0.985791)
Carcinoma, Non-Small-Cell Lung  (Score: 0.985791)
Carcinoma, Hepatocellular  (Score: 0.731059)
pancreatic adenocarcinoma  (Score: 0.731059)
Ovarian Neoplasms  (Score: 0.731059)
Diabetic Nephropathies  (Score: 0.731059)
Lymphoma, Mantle-Cell  (Score: 0.731059)
Carcinoma, Hepatocellular  (Score: 0.731059)
More Information

 

 

Disease Information

 Disease OntologyMeSH
Disease ID:DOID:0050746D020522
Disease Name:mantle cell lymphomaLymphoma, Mantle-Cell
Category:Disease OntologyMeSH
Type:Neoplasms
Define:A B-cell lymphocytic neoplasm due to CD5 positive antigen-naive pregerminal center B-cell within the mantle zone that surrounds normal germinal center follicles.A form of non-Hodgkin lymphoma having a usually diffuse pattern with both small and medium lymphocytes and small cleaved cells. It accounts for about 5% of adult non-Hodgkin lymphomas in the United States and Europe. The majority of mantle-cell lymphomas are associated with a t(11;14) translocation resulting in overexpression of the CYCLIN D1 gene (GENES, BCL-1).
Alias:Lymphoma, Mantle-Cell//Lymphoma, Mantle Cell//Lymphomas, Mantle-Cell//Mantle-Cell Lymphomas//Lymphocytic Lymphoma, Diffuse, Poorly Differentiated//Lymphocytic Lymphoma, Diffuse, Poorly-Differentiated//Mantle-Zone Lymphoma//Lymphoma, Mantle-Zone//Lymphomas, Mantle-Zone//Mantle Zone Lymphoma//Mantle-Zone Lymphomas//Lymphoma, Lymphocytic, Diffuse, Intermediate Differentiated//Lymphoma, Lymphocytic, Diffuse, Poorly-Differentiated//Lymphoma, Small-Cell, Centrocytic//Mantle-Cell Lymphoma//Mantle Cell Lymphoma//Diffuse Lymphocytic Lymphoma, Poorly-Differentiated//Diffuse Lymphocytic Lymphoma, Poorly Differentiated//Lymphoma, Centrocytic Small-Cell//Centrocytic Small-Cell Lymphoma//Centrocytic Small-Cell Lymphomas//Lymphoma, Centrocytic Small Cell//Lymphomas, Centrocytic Small-Cell//Small-Cell Lymphoma, Centrocytic//Small-Cell Lymphomas, Centrocytic//Lymphoma, Lymphocytic, Intermediate

 

Disease Association Statistics

Total Associated ncRNA Number:16   
More Information
Causal ncRNA Number:16
Network:
Top Causal ncRNAs:
FOXP4‑AS1  (Score: 0.731059)
FOXP4-AS1  (Score: 0.731059)
GATA6-AS  (Score: 0.731059)
MANCR  (Score: 0.731059)
LINC01139  (Score: 0.731059)
circCTNNA1  (Score: 0.731059)
circCDYL  (Score: 0.731059)
ZNF667-AS1  (Score: 0.731059)
FOXP4‑AS1  (Score: 0.731059)
FOXP4-AS1  (Score: 0.731059)
More Information

 

Evidence Support

Strong Evidence:Cell Proliferation Assay//qRT-PCR//ELISA//Western Blot
Weak Evidence:

 

Reference

[1] PubMed ID:30636001
Disease Name:Lymphoma, Mantle-Cell
Sample:blood
Dysfunction Pattern:Expression[highly expressed]
Validated Method:Cell Proliferation Assay//qRT-PCR//ELISA//Western Blot
Description:We found that, compared with healthy controls, plasma levels of LINK-A lncRNA and survivin were significantly increased in patients with mantle cell lymphoma.
Causality:Yes
Causal Description:LINK-A lncRNA overexpression promoted cell proliferation, inhibited cell apoptosis, and upregulated survivin expression, while LINK-A lncRNA knockdown had the opposite effect.
Clinical-realted Application: