Entry Detail


General Information

Database ID: LDA0007101
Species: Homo sapiens
Confidence Score: 0.985791
Contents: >> ncRNA Information
>> ncRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference
Causality: Yes
Clinical Significance: Unknown

 


ncRNA Information

Reference Genome Note: GRCh38 for human lncRNAs; GRCm39 for mouse lncRNAs; mRatBN7.2 for rat lncRNAs; hg19 for human circRNAs; mm9 for mouse circRNAs.

ncRNA Symbol:NEAT1
Full Name:nuclear paraspeckle assembly transcript 1
Category:LncRNA
Species:Homo sapiens
Synonyms:LINC00084|NCRNA00084|TP53LC15|TncRNA|VINC
Chromosome:11
Strand:+
Coordinate:
Start Site(bp):65422798End Site(bp):65445540
External Links:
Ensembl ID:ENSG00000245532
Ensembl Transcript ID:N/A
Entrez Gene:283131.0
NONCODE ID:N/A
RefSeq Accession:NR_131012.1

 

ncRNA Association Statistics

Total Associated Disease Number:190   
More Information
Causal Disease Number:146
Network:
Top Causal Diseases:
Parkinson Disease  (Score: 1)
Ovarian Neoplasms  (Score: 1)
Non-alcoholic Fatty Liver Disease  (Score: 1)
Parkinson Disease  (Score: 1)
Leukemia, Myeloid, Acute  (Score: 1)
Osteosarcoma  (Score: 1)
Osteosarcoma  (Score: 1)
Leukemia, Myeloid, Acute  (Score: 1)
Colorectal Neoplasms  (Score: 1)
Carcinoma, Hepatocellular  (Score: 1)
More Information

 

 

Disease Information

 Disease OntologyMeSH
Disease ID:DOID:2725
Disease Name:capillary hemangioma
Category:Disease Ontology
Type:Neoplasms
Define:A hemangioma that is characterized by the presence of capillary-sized vascular channels without prominent epithelioid endothelial cells.
Alias:Congenital vascular hamartoma//Congenital vascular naevus//Infantile hemangioma//Juvenile hemangioma//Strawberry haemangioma//Strawberry nevus//Strawberry nevus of skin//cellular hemangioma of Infancy

 

Disease Association Statistics

Total Associated ncRNA Number:28   
More Information
Causal ncRNA Number:8
Network:
Top Causal ncRNAs:
MALAT1  (Score: 0.985791)
CYTOR  (Score: 0.985791)
NEAT1  (Score: 0.985791)
MALAT1  (Score: 0.985791)
CYTOR  (Score: 0.985791)
NEAT1  (Score: 0.985791)
TUG1  (Score: 0.731059)
TUG1  (Score: 0.731059)
More Information

 

Evidence Support

Strong Evidence:In Vivo Experiment//Western Blot//MeRIP//Transfection//Migration Assay//CCK8//qRT-PCR//RIP//Luciferase Report Assay//Cell Apoptosis Assay//Invasion Assay//Transwell Assay
Weak Evidence:

 

Reference

[1] PubMed ID:32945470
Disease Name:capillary hemangioma
Sample:IH tissues
Dysfunction Pattern:regulation[HIF1α/NF-κB signaling pathway]
Validated Method:qRT-PCR//Luciferase Report Assay//Western Blot
Description:Reverse transcription?-quantitative PCR indicated that IH tissues exhibited high expression levels of NEAT1 and hypoxia?inducible factor 1α (HIF1α), and low expression levels of the microRNA (miR)?33a?5p. Collectively, the results revealed that depletion of lncRNA NEAT1 suppressed the tumorigenesis of IH by competitively binding miR‑33a‑5p and thereby stimulating the HIF1α/NF‑κB signaling pathway.
Causality:Yes
Causal Description: Small interfering RNA?mediated depletion of NEAT1 suppressed hemangioma endothelial cell (HemEC) proliferation, migration and invasion.
Clinical-realted Application:

[2] PubMed ID:35182329
Disease Name:capillary hemangioma
Sample:IH tissues and cells
Dysfunction Pattern:Interaction(miR-378b/FOSL1 axis)
Validated Method:In Vivo Experiment//Western Blot//MeRIP//Transfection//Migration Assay//CCK8//RIP//qRT-PCR//Luciferase Report Assay//Cell Apoptosis Assay//Invasion Assay//Transwell Assay
Description: ALKBH5, lncRNA NEAT1 and FOLS1 expression was elevated in IH tissues, while miR-378b was downregulated.ALKBH5 might have great potential as therapeutic target for IH, since ALKBH5 silencing suppressed IH progression by regulation of the NEAT1/miR-378b/FOSL1 axis.
Causality:Yes
Causal Description:In addition, miR-378b was the target of lncRNA NEAT1, and its overexpression reversed the promotion effect of lncRNA NEAT1 overexpression on IH cell tumor-like behaviors. Moreover, FOLS1 was the target of miR-378b, and its overexpression reversed the inhibitory effect of miR-378b overexpression on IH cell tumor-like behaviors in vitro.
Clinical-realted Application: