Entry Detail


General Information

Database ID: LDA0015384
Species: Homo sapiens
Confidence Score: 0.548294
Contents: >> ncRNA Information
>> ncRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference
Causality: Unknown
Clinical Significance: Unknown

 


ncRNA Information

Reference Genome Note: GRCh38 for human lncRNAs; GRCm39 for mouse lncRNAs; mRatBN7.2 for rat lncRNAs; hg19 for human circRNAs; mm9 for mouse circRNAs.

ncRNA Symbol:MALAT1
Full Name:metastasis associated lung adenocarcinoma transcript 1
Category:LncRNA
Species:Homo sapiens
Synonyms:HCN|LINC00047|NCRNA00047|NEAT2|PRO2853
Chromosome:11
Strand:+
Coordinate:
Start Site(bp):65497738End Site(bp):65506516
External Links:
Ensembl ID:ENSG00000251562
Ensembl Transcript ID:N/A
Entrez Gene:378938.0
NONCODE ID:N/A
RefSeq Accession:NR_002819.4

 

ncRNA Association Statistics

Total Associated Disease Number:204   
More Information
Causal Disease Number:132
Network:
Top Causal Diseases:
Breast Neoplasms  (Score: 1)
Breast Neoplasms  (Score: 1)
Coronary Artery Disease  (Score: 1)
Stomach Neoplasms  (Score: 1)
Colorectal Neoplasms  (Score: 1)
tongue squamous cell carcinoma  (Score: 1)
Colorectal Neoplasms  (Score: 1)
Stomach Neoplasms  (Score: 1)
Carcinoma, Non-Small-Cell Lung  (Score: 1)
Carcinoma, Renal Cell  (Score: 1)
More Information

 

 

Disease Information

 Disease OntologyMeSH
Disease ID:D005770
Disease Name:Gastrointestinal Neoplasms
Category:MeSH
Type:Neoplasms
Define:Tumors or cancer of the GASTROINTESTINAL TRACT, from the MOUTH to the ANAL CANAL.
Alias:Gastrointestinal Neoplasms//Gastrointestinal Neoplasm//Neoplasm, Gastrointestinal//Neoplasms, Gastrointestinal//Cancer of Gastrointestinal Tract//Gastrointestinal Tract Cancer//Gastrointestinal Tract Cancers//Cancer of the Gastrointestinal Tract//Gastrointestinal Cancer//Cancer, Gastrointestinal//Cancers, Gastrointestinal//Gastrointestinal Cancers

 

Disease Association Statistics

Total Associated ncRNA Number:6   
More Information
Causal ncRNA Number:0
Network:
Top Causal ncRNAs:
More Information

 

Evidence Support

Strong Evidence:
Weak Evidence:Meta-analysis

 

Reference

[1] PubMed ID:30719108
Disease Name:Gastrointestinal Neoplasms
Sample:
Dysfunction Pattern:Expression[highly expressed]
Validated Method:Meta-analysis
Description:A total of ten studies reported the OS of 1,052 patients, according to MALAT1 expression levels. Heterogeneity analysis revealed no heterogeneity among these studies, therefore, the fixed-effects model (I2, 0.0%; P=0.528) was assessed in the meta-analysis. Overall, the pooled results confirmed a significant association between high MALAT1 expression and poor OS in digestive system malignancies, with a HR value of 1.62 (95% CI, 1.35–1.88; P<0.001; Fig. 2). Although there was no significant heterogeneity among the studies, a subgroup meta-analysis was conducted on tumor type, country, sample size and analysis type (Table III). A significant association was identified between the expression of MALAT1 and the OS of patients with digestive system malignant tumors in China (HR, 1.63; 95% CI, 1.34–1.91). The association between MALAT1 and OS was significant in studies with a sample size ≥100 (HR, 1.57; 95% CI, 1.27–1.88; P<0.001) and <100 (HR, 1.76; 95% CI, 1.21–2.31; P<0.001). Furthermore, MALAT1 was also identified to be significantly associated with OS of patients in studies with multivariate analysis (HR, 1.51; 95% CI, 1.19–1.84; P<0.001) and non-multivariate analysis (HR, 1.84; 95% CI, 1.37–2.31; P<0.001). Furthermore, sensitivity analysis indicated the robustness of the meta-analysis results (Fig. 3).
Causality:No
Causal Description:
Clinical-realted Application: