Entry Detail

General Information

Database ID: LDA0015386
Species: Homo sapiens
Confidence Score: 0.731059
Contents: >> ncRNA Information
>> ncRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference
Causality: Unknown
Clinical Significance: Unknown

 


ncRNA Information

Reference Genome Note: GRCh38 for human lncRNAs; GRCm39 for mouse lncRNAs; mRatBN7.2 for rat lncRNAs; hg19 for human circRNAs; mm9 for mouse circRNAs.

ncRNA Symbol:MALAT1
Full Name:metastasis associated lung adenocarcinoma transcript 1
Category:LncRNA
Species:Homo sapiens
Synonyms:HCN|LINC00047|NCRNA00047|NEAT2|PRO2853
Chromosome:11
Strand:+
Coordinate:
Start Site(bp):65497738End Site(bp):65506516
External Links:
Ensembl ID:ENSG00000251562
Ensembl Transcript ID:N/A
Entrez Gene:378938.0
NONCODE ID:N/A
RefSeq Accession:NR_002819.4

 

ncRNA Association Statistics

Total Associated Disease Number:204   
More Information
Causal Disease Number:132
Network:
Top Causal Diseases:
Breast Neoplasms  (Score: 1)
Breast Neoplasms  (Score: 1)
Coronary Artery Disease  (Score: 1)
Stomach Neoplasms  (Score: 1)
Colorectal Neoplasms  (Score: 1)
tongue squamous cell carcinoma  (Score: 1)
Colorectal Neoplasms  (Score: 1)
Stomach Neoplasms  (Score: 1)
Carcinoma, Non-Small-Cell Lung  (Score: 1)
Carcinoma, Renal Cell  (Score: 1)
More Information

 

 

Disease Information

 Disease OntologyMeSH
Disease ID:DOID:0080208D065626
Disease Name:non-alcoholic fatty liver diseaseNon-alcoholic Fatty Liver Disease
Category:Disease OntologyMeSH
Type:Digestive System Diseases
Define:A fatty liver disease characterized by the storing of excess fat in liver cells which is not caused by heavy alcohol use.Fatty liver finding without excessive ALCOHOL CONSUMPTION.
Alias:NAFLDNon-alcoholic Fatty Liver Disease//Non alcoholic Fatty Liver Disease//NAFLD//Nonalcoholic Fatty Liver Disease//Fatty Liver, Nonalcoholic//Fatty Livers, Nonalcoholic//Liver, Nonalcoholic Fatty//Livers, Nonalcoholic Fatty//Nonalcoholic Fatty Liver//Nonalcoholic Fatty Livers//Nonalcoholic Steatohepatitis//Nonalcoholic Steatohepatitides//Steatohepatitides, Nonalcoholic//Steatohepatitis, Nonalcoholic

 

Disease Association Statistics

Total Associated ncRNA Number:82   
More Information
Causal ncRNA Number:30
Network:
Top Causal ncRNAs:
NEAT1  (Score: 1)
NEAT1  (Score: 1)
Gas5  (Score: 0.985791)
Gas5  (Score: 0.985791)
RMRP  (Score: 0.731059)
hsa_circ_0057558  (Score: 0.731059)
Pvt1  (Score: 0.731059)
PTK2  (Score: 0.731059)
hsa_circ_0001805  (Score: 0.731059)
Platr4  (Score: 0.731059)
More Information

 

Evidence Support

Strong Evidence:In Vivo Experiment//Western Blot//Transfection//qRT-PCR//RIP//Luciferase Report Assay//H&E Staining//Oil Red O Staining//IHC//ChIP
Weak Evidence:

 

Reference

[1] PubMed ID:35769097
Disease Name:Non-alcoholic Fatty Liver Disease
Sample:hepatocytes
Dysfunction Pattern:Interaction(miR-206/ARNT Axis)
Validated Method:In Vivo Experiment//Western Blot//Transfection//qRT-PCR//RIP//Luciferase Report Assay//H&E Staining//Oil Red O Staining//IHC//Bioinformatics Analysis//ChIP
Description:The data revealed expression of MALAT1 was up-regulated in vitro and in vivo in NAFLD, and knockdown of MALAT1 suppressed FFA-induced lipid accumulation in hepatocytes. Meanwhile, MALAT1 upregulated the expression of ARNT through binding with miR-206. Moreover, miR-206 inhibitor reversed MALAT1 knockdown effects in decreased lipid accumulation in FFA-treated hepatocytes. Furthermore, ARNT could inhibit the expression of PPARα via binding with PPARα promoter. Knockdown of MALAT1 significantly upregulated the level of PPARα and downregulated the expression of CD36, while PPARα knockdown reversed these phenomena. MALAT1 regulated PPARα/CD36 -mediated hepatic lipid accumulation in NAFLD through regulation of miR-206/ARNT axis.
Causality:No
Causal Description:
Clinical-realted Application: