Entry Detail

General Information

Database ID: LDA0022701
Species: Homo sapiens
Confidence Score: 0.731059
Contents: >> ncRNA Information
>> ncRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference
Causality: Unknown
Clinical Significance: Yes

 


ncRNA Information

Reference Genome Note: GRCh38 for human lncRNAs; GRCm39 for mouse lncRNAs; mRatBN7.2 for rat lncRNAs; hg19 for human circRNAs; mm9 for mouse circRNAs.

ncRNA Symbol:CCDC80
Full Name:coiled-coil domain containing 80
Category:LncRNA
Species:Homo sapiens
Synonyms:CL2|DRO1|LINC01279|SSG1|URB|okuribin
Chromosome:3
Strand:-
Coordinate:
Start Site(bp):112596797End Site(bp):112641143
External Links:
Ensembl ID:ENSG00000091986
Ensembl Transcript ID:N/A
Entrez Gene:151887.0
NONCODE ID:N/A
RefSeq Accession:N/A

 

ncRNA Association Statistics

Total Associated Disease Number:4   
More Information
Causal Disease Number:0
Network:
Top Causal Diseases:
More Information

 

 

Disease Information

 Disease OntologyMeSH
Disease ID:DOID:3717
Disease Name:gastric adenocarcinoma
Category:Disease Ontology
Type:Neoplasms
Define:A stomach carcinoma that derives_from epithelial cells of glandular origin.
Alias:adenocarcinoma of stomach//stomach adenocarcinoma

 

Disease Association Statistics

Total Associated ncRNA Number:40   
More Information
Causal ncRNA Number:28
Network:
Top Causal ncRNAs:
MALAT1  (Score: 0.985791)
MALAT1  (Score: 0.985791)
PMS2P2  (Score: 0.731059)
ITGB1-DT  (Score: 0.731059)
FOXCUT  (Score: 0.731059)
HAND2-AS1  (Score: 0.731059)
DIRC1  (Score: 0.731059)
RP1-163G9.1  (Score: 0.731059)
TM4SF1-AS1  (Score: 0.731059)
TRPM2-AS  (Score: 0.731059)
More Information

 

Evidence Support

Strong Evidence:qRT-PCR
Weak Evidence:

 

Reference

[1] PubMed ID:34507839
Disease Name:gastric adenocarcinoma
Sample:90 paired GC and matched adjacent normal tissue specimens
Dysfunction Pattern:Expression [highly expressed]
Validated Method:qRT-PCR
Description:LINC01279 was highly expressed in gastric cancer tissues and serum of gastric cancer patients (P < 0.05).
Causality:No
Causal Description:
Clinical-realted Application:The expression level of lncRNA 01279 was closely related to vascular invasion, nerve invasion, T-stage, lymph node metastasis, and advanced clinical-stage of gastric cancer (P < 0.05). There was a significant negative correlation between the expression of LINC01279 and the overall survival of gastric-cancer patients (P < 0.05).